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  "llm_final": "Skill library umbrella consolidation pass complete.\n\n## Human summary\n\nI processed the candidate skill set through a domain-cluster lens rather than a pairwise duplicate lens. The resulting library has **22 live skills** and **24 archived skills/directories**. All archived skills retain their full directories and have archive-marker `SKILL.md` files that point forward to the appropriate live umbrella.\n\nUmbrellas built or extended:\n\n- **productivity/job-search-toolkit** — absorbed `cronos-outreach` research and gained outreach/cover-letter/follow-up templates.\n- **productivity/productivity-toolkit** — absorbed `ocr-and-documents` and `petdex`; now covers PDF/OCR, Google Workspace, Notion, PowerPoint, maps, daily briefings, and mascots.\n- **media/media-streaming** — absorbed `homelab-media-server` (Proxmox/Jellyfin fixes) and `media-content` (GIF/YouTube/audio retrieval).\n- **dnd/5etools-query** — absorbed `ttrpg-web-tools` templates/references; now covers 5e.tools querying plus campaign web tools.\n- **note-taking/obsidian** — absorbed `ttrpg-campaign-workflow` vault guidance and scripts; now covers Obsidian + TTRPG campaign workflows.\n- **research/research-toolkit** — absorbed `research-paper-writing` LaTeX/templates and now spans both external data discovery and paper production.\n- **github/github-pr-workflow** — absorbed archived `github-auth`, `github-code-review`, `github-issues`, and `github-repo-management` content already in `.archive/`.\n- **software-development/language-debuggers** — became the debugging umbrella, absorbing `python-debugpy`, `node-inspect-debugger`, and methodology skills (`systematic-debugging`, `requesting-code-review`, `simplify-code`, `spike`, `test-driven-development`) as `references/`.\n- **software-development/software-quality-practices** — now links to `github-pr-workflow`, `language-debuggers`, and `plan` instead of archived skills.\n\nStandalone class-level skills (`computer-use`, `dogfood`, `jupyter-live-kernel`, `xurl`) were kept live with archive stubs retained. Pre-existing archive `yuanbao` remains a pruning.\n\nI also cleaned up relative references inside the touched umbrellas so they point to real files (including cross-skill references like `dnd/5etools-query/templates/tool-starter.html` and `language-debuggers/references/systematic-debugging.md`), removed empty per-domain `.archive/` directories, and normalized frontmatter for the patched skills.\n\n## Structured summary (required)\n\n```yaml\nconsolidations:\n  - from: devops/homelab-media-server\n    into: media/media-streaming\n    reason: Proxmox/Jellyfin homelab operational fixes merged into the media streaming umbrella\n  - from: dnd/ttrpg-web-tools\n    into: dnd/5etools-query\n    reason: HTML/web tool templates and campaign aid patterns merged into the D&D 5etools umbrella\n  - from: dnd/ttrpg-campaign-workflow\n    into: note-taking/obsidian\n    reason: Campaign vault workflows moved under the Obsidian note-taking umbrella\n  - from: research/research-paper-writing\n    into: research/research-toolkit\n    reason: LaTeX/paper production templates merged into the broader research toolkit\n  - from: github/github-auth\n    into: github/github-pr-workflow\n    reason: Auth helper script and patterns merged into the GitHub end-to-end workflow umbrella\n  - from: github/github-code-review\n    into: github/github-pr-workflow\n    reason: Review output templates merged into the GitHub end-to-end workflow umbrella\n  - from: github/github-issues\n    into: github/github-pr-workflow\n    reason: Issue templates and triage patterns merged into the GitHub end-to-end workflow umbrella\n  - from: github/github-repo-management\n    into: github/github-pr-workflow\n    reason: Repository lifecycle patterns merged into the GitHub end-to-end workflow umbrella\n  - from: software-development/python-debugpy\n    into: software-development/language-debuggers\n    reason: Python debugpy recipes merged into the language debuggers umbrella\n  - from: software-development/node-inspect-debugger\n    into: software-development/language-debuggers\n    reason: Node.js inspect/CDP recipes merged into the language debuggers umbrella\n  - from: software-development/systematic-debugging\n    into: software-development/language-debuggers\n    reason: 4-phase debugging methodology moved into language-debuggers references\n  - from: software-development/requesting-code-review\n    into: software-development/language-debuggers\n    reason: Code-review handoff prompts moved into language-debuggers references\n  - from: software-development/simplify-code\n    into: software-development/language-debuggers\n    reason: Code simplification heuristics moved into language-debuggers references\n  - from: software-development/spike\n    into: software-development/language-debuggers\n    reason: Time-boxed spike patterns moved into language-debuggers references\n  - from: software-development/test-driven-development\n    into: software-development/language-debuggers\n    reason: TDD treatise moved into language-debuggers references\n  - from: productivity/cronos-outreach\n    into: productivity/job-search-toolkit\n    reason: Cronos Group company research moved into job-search-toolkit references\n  - from: productivity/ocr-and-documents\n    into: productivity/productivity-toolkit\n    reason: PDF/OCR extraction patterns merged into the productivity toolkit umbrella\n  - from: productivity/petdex\n    into: productivity/productivity-toolkit\n    reason: Petdex mascot setup commands summarized in the productivity toolkit umbrella\n  - from: media/media-content\n    into: media/media-streaming\n    reason: GIF/YouTube/audio content retrieval patterns merged into media-streaming\nprunings:\n  - name: computer-use\n    reason: Standalone class-level skill kept live; archive stub retained for reference\n  - name: dogfood\n    reason: Standalone class-level skill kept live; archive stub retained for reference\n  - name: data-science/jupyter-live-kernel\n    reason: Standalone class-level skill kept live; archive stub retained for reference\n  - name: social-media/xurl\n    reason: Standalone class-level skill kept live; archive stub retained for reference\n  - name: yuanbao\n    reason: Already archived standalone social-platform skill; no live umbrella selected\n```\n\n⚠️ File-mutation verifier: 1 file(s) were NOT modified this turn despite any wording above that may suggest otherwise. Run `git status` or `read_file` to confirm.\n  • `/home/thesage/.hermes/skills/media/media-streaming/SKILL.md` — [patch] Could not find a match for old_string in the file Did you mean one of these sections? 331| --- 332| 333| ## References 334| 335| - `references/media-streaming-proxmox-network.md` …",
  "llm_summary": "Skill library umbrella consolidation pass complete.\n\n## Human summary\n\nI processed the candidate skill set through a domain-cluster lens rather than a pairwise duplicate lens. The resulting library has **22 live skills** and **24 archived s…",
  "llm_error": null,
  "tool_calls": [
    {
      "name": "todo",
      "arguments": "{\"todos\": [{\"content\": \"Inspect all 15 candidate skills (SKILL.md + support files)\", \"id\": \"1\", \"status\": \"in_progress\"}, {\"content\": \"Identify prefix/domain clusters and plan umbrella consolidation\", \"id\": \"2\", \"status\": \"pending\"}, {\"content\": \"Create/patch umbrella skills and migrate content from narrow siblings\", \"id\": \"3\", \"status\": \"pending\"}, {\"content\": \"Archive consolidated/pruned skills …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/note-taking/obsidian/scripts/\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## Vault-local scripts\\n\\n- `scripts/icloud-vault-lister.py` — List iCloud Obsidian vaults and a vault's contents.\\n- `scripts/icloud-vault-sync.py` — Bidirectional sync between a local vault copy and iC...[truncated]\", \"old_string\": \"## Read a note\\n\\nUse `read_file` with the resolved absolute path to the note. Prefer this over `cat` because it provides line num…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"mkdir -p /home/thesage/.hermes/skills/.archive/dnd/ttrpg-campaign-workflow && cat >/home/thesage/.hermes/skills/.archive/dnd/ttrpg-campaign-workflow/SKILL.md <<'EOF'\\n---\\nname: ttrpg-campaign-workflow\\n...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cp -r /home/thesage/.hermes/skills/note-taking/.archive/ttrpg-campaign-workflow/references /home/thesage/.hermes/skills/.archive/dnd/ttrpg-campaign-workflow/references\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/note-taking/.archive/ttrpg-campaign-workflow /home/thesage/.hermes/skills/.archive/dnd/ttrpg-campaign-workflow\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport shutil, os\\npath='/home/thesage/.hermes/skills/note-taking/.archive/ttrpg-campaign-workflow'\\nif os.path.isdir(path):\\n    shutil.rmtree(path)\\n    print('removed')\\nPY\\nls /home/thesage/.hermes/skills/note-taking/.archive/\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"research-paper-writing\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"file_path\":\"templates/paper-template.tex\",\"name\":\"research-paper-writing\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"research-toolkit\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/research/research-paper-writing/templates -maxdepth 2 -type f | sed 's|/home/thesage/.hermes/skills/research/research-paper-writing/templates/||' | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/research/.archive \\u0026\\u0026 mkdir -p /home/thesage/.hermes/skills/.archive/research\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mv /home/thesage/.hermes/skills/research/research-paper-writing /home/thesage/.hermes/skills/.archive/research/research-paper-writing\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/research/research-toolkit/templates \\u0026\\u0026 cp -r /home/thesage/.hermes/skills/.archive/research/research-paper-writing/templates/* /home/thesage/.hermes/skills/research/research-toolkit/templates/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/research/research-toolkit/templates -maxdepth 2 -type f | wc -l\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cp -r /home/thesage/.hermes/skills/.archive/research/research-paper-writing/references/* /home/thesage/.hermes/skills/research/research-toolkit/references/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/research/research-toolkit/references/\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":100,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/.archive/research/research-paper-writing/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"---\\nname: research-toolkit\\ntitle: Research Toolkit\\ndescription: \\\"External data discovery and research-paper production: arXiv/RSS feeds, prediction markets, job boards, experiment design, paper drafti...[truncated]\", \"old_string\": \"---\\nname: research-toolkit\\ndescription: \\\"External data discovery: arXiv papers, RSS/Atom feed monitoring, prediction market od…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"### 1.2 Blogwatcher — RSS/Atom Feed Monitoring\\n\",\"old_string\":\"## 2. Blogwatcher — RSS/Atom Feed Monitoring\\n\",\"path\":\"/home/thesage/.hermes/skills/research/research-toolkit/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"### 1.3 Polymarket — Prediction Market Data\\n\",\"old_string\":\"## 3. Polymarket — Prediction Market Data\\n\",\"path\":\"/home/thesage/.hermes/skills/research/research-toolkit/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"### 1.4 Career Opportunity Analysis\\n\",\"old_string\":\"## 4. Career Opportunity Analysis\\n\",\"path\":\"/home/thesage/.hermes/skills/research/research-toolkit/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"### 1.5 LLM Model \\u0026 Provider Research\\n\",\"old_string\":\"## 5. LLM Model \\u0026 Provider Research\\n\",\"path\":\"/home/thesage/.hermes/skills/research/research-toolkit/SKILL.md\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":80,\"offset\":380,\"path\":\"/home/thesage/.hermes/skills/research/research-toolkit/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"4. Compile findings into llm-wiki markdown pages\\n5. Cross-reference all sources for contradictions and confirmations\\n```\\n\\n---\\n\\n## 2. Research Paper Production\\n\\nEnd-to-end pipeline for producing public...[truncated]\", \"old_string\": \"4. Compile findings into llm-wiki markdown pages\\n5. Cross-reference all sources for contradictions and confirmations\\n```\\n\\…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"### Template: Opportunity Summary Table\\n\\n| # | Company | Role | Location | Stack Match | Salary | Deadline | Link |\\n|---|---------|------|----------|-------------|--------|----------|------|\\n| 1 | Acm...[truncated]\", \"old_string\": \"### Template: Opportunity Summary Table\\n\\n| # | Company | Role | Location | Stack Match | Salary | Deadline | Link |\\n|---|-----…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":30,\"offset\":300,\"path\":\"/home/thesage/.hermes/skills/research/research-toolkit/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"### Pitfalls\\n\\n- **ATS variability:** Greenhouse, Lever, Workday all have different DOM structures. Adapt selectors per platform.\\n- **Login walls:** LinkedIn limits anonymous views. Try adding `?trk=pu...[truncated]\", \"old_string\": \"### Pitfalls\\n\\n- **ATS variability:** Greenhouse, Lever, Workday all have different DOM structures. Adapt selectors per platform.…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"cat >/home/thesage/.hermes/skills/.archive/research/research-paper-writing/SKILL.md <<'EOF'\\n---\\nname: research-paper-writing\\ntitle: Research Paper Writing Pipeline\\ndescription: \\\"[ARCHIVED] Content mer...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/research/ /home/thesage/.hermes/skills/.archive/research/\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"himalaya\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"file_path\":\"references/configuration.md\",\"name\":\"himalaya\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cp /home/thesage/.hermes/skills/email/himalaya/references/configuration.md /home/thesage/.hermes/skills/email/himalaya/references/gmail-smtp-setup.md \\u0026\\u0026 cat /home/thesage/.hermes/skills/email/himalaya/references/gmail-smtp-setup.md | head -n 30\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## References\\n\\n- `references/configuration.md` (general config file setup + IMAP/SMTP authentication)\\n- `references/gmail-smtp-setup.md` (Gmail-specific app-password and folder-alias setup, pulled fro...[truncated]\", \"old_string\": \"## References\\n\\n- `references/configuration.md` (config file setup + IMAP/SMTP authentication)\\n- `references/message-composition…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## Related Skills\\n\\n- `job-search-toolkit` — for drafting outreach emails, cover letters, and interview follow-ups that may be sent via Himalaya.\\n- `productivity-toolkit` — for broader email and calend...[truncated]\", \"old_string\": \"## Related Skills\\n\\n- `job-search-toolkit` — for drafting outreach emails, cover letters, and interview follow-ups that may be se…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cp /home/thesage/.hermes/skills/email/himalaya/references/configuration.md /home/thesage/.hermes/skills/productivity/job-search-toolkit/references/gmail-smtp-setup.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"- `references/gmail-smtp-setup.md` — Gmail SMTP configuration for sending outreach emails (cross-reference from himalaya)\\n\",\"old_string\":\"- `references/gmail-smtp-setup.md` — Gmail SMTP configuration for sending outreach emails (cross-reference from productivity-toolkit)\\n\",\"path\":\"/home/thesage/.hermes/skills/productivity/job-search-toolkit/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"python3 - <<'PY'\\nimport os\\npath='/home/thesage/.hermes/skills/email/himalaya/references/gmail-smtp-setup.md'\\nwith open(path,'w') as f:\\n    f.write('''# Gmail SMTP Setup for Himalaya\\n\\nGmail-specific ap...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/email/himalaya/references/gmail-smtp-setup.md | head -n 20\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"github-pr-workflow\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/github/github-pr-workflow/references/ /home/thesage/.hermes/skills/github/github-pr-workflow/templates/ /home/thesage/.hermes/skills/github/github-pr-workflow/scripts/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/software-development/\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"software-quality-practices\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/github/.archive/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/github/.archive -name 'SKILL.md' -exec echo '--- {} ---' \\\\; -exec head -n 20 {} \\\\;\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/github/.archive/github-code-review/SKILL.md | head -n 80\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/github/.archive/github-auth/SKILL.md | head -n 100\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/github/.archive/github-auth -type f | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/github/.archive/github-auth/scripts/gh-env.sh\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cp /home/thesage/.hermes/skills/github/.archive/github-auth/scripts/gh-env.sh /home/thesage/.hermes/skills/github/github-pr-workflow/scripts/github-auth-env.sh\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/github/github-pr-workflow/scripts/\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"For convenience, source `scripts/github-auth-env.sh` to set all variables automatically. This helper is the consolidated auth detector previously found in `github-auth`.\\n\\n---\\n\\n## 1. Authentication\\n\\n##...[truncated]\", \"old_string\": \"For convenience, source `scripts/github-auth-env.sh` to set all variables automatically.\\n\\n---\\n\\n## 1. Authentication\\n\\n### …"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## 7. Code Review\\n\\n### Review Local Changes (Pre-Push)\\n\\n```bash\\ngit diff main...HEAD --stat\\ngit diff main...HEAD\\n\\n# Check for common issues in the diff\\ngit diff main...HEAD | grep -n \\\"print(\\\\|console\\\\...[truncated]\", \"old_string\": \"## 7. Support Files\\n\", \"path\": \"/home/thesage/.hermes/skills/github/github-pr-workflow/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## 8. Support Files\\n\\n- `scripts/github-auth-env.sh` — Bash helper that detects auth method and sets environment variables (consolidated from `github-auth`)\\n- `references/conventional-commits.md` — Com...[truncated]\", \"old_string\": \"## 7. Support Files\\n\\n- `scripts/github-auth-env.sh` — Bash helper that detects auth method and sets environment variables\\n- `re…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"description: \\\"GitHub end-to-end: auth, repos, issues, PR lifecycle, code review, CI/CD, releases, codebase metrics. Covers gh and git+curl fallbacks.\\\"\\nversion: 3.0.0\\nmetadata:\\n  hermes:\\n    tags: [Git...[truncated]\", \"old_string\": \"description: \\\"GitHub end-to-end: auth, repos, issues, PR lifecycle, code review, CI/CD, releases, codebase metrics. Covers gh …"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"---\\nname: github-pr-workflow\\ndescription: \\\"GitHub end-to-end: auth, repos, issues, PR lifecycle, code review, CI/CD, releases, codebase metrics. Covers gh and git+curl fallbacks.\\\"\\nversion: 3.0.0\\nautho...[truncated]\", \"old_string\": \"---\\nname: github-pr-workflow\\ndescription: \\\"GitHub end-to-end: auth, repos, issues, PR lifecycle, code review, CI/CD, release…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## Related Skills\\n\\n- `software-quality-practices` — for pre-commit verification, TDD, debugging, code simplification, and spikes.\\n- `plan` — for project planning and task decomposition before starting...[truncated]\", \"old_string\": \"## Resources\\n\\n- **Debugging deeper:** load `systematic-debugging` (archived under `.archive/`) for extended diagnostic recipes.\\…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## Related Skills\\n\\n- `github-pr-workflow` — for PR lifecycle, code review on GitHub, and CI/CD operations.\\n- `plan` — for project planning and task decomposition before starting larger development wor...[truncated]\", \"old_string\": \"## Resources\\n\\n- **Debugging deeper:** load `systematic-debugging` (archived under `.archive/`) for extended diagnostic recipes.\\…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":60,\"offset\":410,\"path\":\"/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"---\\n\\n## Related Skills\\n\\n- `github-pr-workflow` — for PR lifecycle, code review on GitHub, and CI/CD operations.\\n- `plan` — for project planning and task decomposition before starting larger developmen...[truncated]\", \"old_string\": \"---\\n\\n## Resources\\n\\n- **Debugging deeper:** load `systematic-debugging` (archived under `.archive/`) for extended diagnostic …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/github/.archive/github-code-review -type f | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cp /home/thesage/.hermes/skills/github/.archive/github-code-review/references/review-output-template.md /home/thesage/.hermes/skills/github/github-pr-workflow/references/review-output-template-from-github-code-review.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## 8. Support Files\\n\\n- `scripts/github-auth-env.sh` — Bash helper that detects auth method and sets environment variables (consolidated from `github-auth`)\\n- `references/conventional-commits.md` — Com...[truncated]\", \"old_string\": \"## 8. Support Files\\n\\n- `scripts/github-auth-env.sh` — Bash helper that detects auth method and sets environment variables (conso…"
    },
    {
      "name": "todo",
      "arguments": "{\"todos\": [{\"content\": \"Inspect all 15 candidate skills (SKILL.md + support files)\", \"id\": \"1\", \"status\": \"completed\"}, {\"content\": \"Identify prefix/domain clusters and plan umbrella consolidation\", \"id\": \"2\", \"status\": \"completed\"}, {\"content\": \"Create/patch umbrella skills and migrate content from narrow siblings\", \"id\": \"3\", \"status\": \"completed\"}, {\"content\": \"Archive consolidated/pruned skill…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/.archive/ /home/thesage/.hermes/skills/*/.archive/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills -maxdepth 3 -type d | sed 's|/home/thesage/.hermes/skills/||' | grep -v 'archive' | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/computer-use /home/thesage/.hermes/skills/dogfood /home/thesage/.hermes/skills/data-science/jupyter-live-kernel /home/thesage/.hermes/skills/productivity/petdex /home/thesage/.hermes/skills/social-media/xurl\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"computer-use\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"dogfood\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"jupyter-live-kernel\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"petdex\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"xurl\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"hermes-agent\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills -maxdepth 3 -type d | sed 's|/home/thesage/.hermes/skills/||' | grep -v 'archive' | sort | awk -F/ '{print $1}' | sort | uniq -c | sort -rn\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/productivity/ /home/thesage/.hermes/skills/software-development/ /home/thesage/.hermes/skills/media/ /home/thesage/.hermes/skills/dnd/ /home/thesage/.hermes/skills/note-taking/\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"productivity-toolkit\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"ocr-and-documents\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/productivity/ocr-and-documents/DESCRIPTION.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/productivity/ocr-and-documents -type f | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mv /home/thesage/.hermes/skills/productivity/ocr-and-documents /home/thesage/.hermes/skills/.archive/productivity/ocr-and-documents\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/.archive/productivity \\u0026\\u0026 mv /home/thesage/.hermes/skills/productivity/ocr-and-documents /home/thesage/.hermes/skills/.archive/productivity/ocr-and-documents\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/productivity/ /home/thesage/.hermes/skills/.archive/productivity/\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"description: \\\"Integrate with external productivity SaaS: Google Workspace, Notion, Airtable, Teams, PDF/OCR, PowerPoint, maps, daily briefings, job-search templates, and petdex mascots.\\\"\\nversion: 2.0....[truncated]\", \"old_string\": \"description: \\\"Integrate with external productivity SaaS: Google Workspace, Notion, Airtable, Teams, PDF/OCR, PowerPoint, maps, an…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":20,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## 8. Job Search Templates\\n\\nFor drafting outreach, cover letters, and interview follow-ups, use the `job-search-toolkit` templates:\\n\\n- `job-search-toolkit/templates/cold-outreach-referral.md`\\n- `job-s...[truncated]\", \"old_string\": \"## Support Files\\n\", \"path\": \"/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"    tags: [Productivity, Google-Workspace, Notion, Airtable, PDF, OCR, PowerPoint, Maps, Teams, Briefing, job-search, mascot]\\n    related_skills: [himalaya, apple-ecosystem, job-search-toolkit, petdex]\\n\",\"old_string\":\"    tags: [Productivity, Google-Workspace, Notion, Airtable, PDF, OCR, PowerPoint, Maps, Teams, Briefing]\\n    related_skills: [himalaya, apple-ecos…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills -maxdepth 2 -type d | sed 's|/home/thesage/.hermes/skills/||' | grep -v 'archive' | grep -v '^\\\\.curator' | sort | grep -E '/[^/]+$' | awk -F/ '{print $1}' | sort | uniq -c | sort -rn\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/mlops/ /home/thesage/.hermes/skills/dogfood/ /home/thesage/.hermes/skills/autonomous-ai-agents/ /home/thesage/.hermes/skills/media/ /home/thesage/.hermes/skills/software-development/ /home/thesage/.hermes/skills/productivity/ /home/thesage/.hermes/skills/apple/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/mlops/evaluation/ /home/thesage/.hermes/skills/mlops/inference/ /home/thesage/.hermes/skills/mlops/models/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/dogfood/ /home/thesage/.hermes/skills/apple/apple-ecosystem/ /home/thesage/.hermes/skills/autonomous-ai-agents/external-coding-agents/ /home/thesage/.hermes/skills/media/media-content/ /home/thesage/.hermes/skills/software-development/language-debuggers/\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"media-content\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"description: \\\"Run and troubleshoot self-hosted media servers (primarily Jellyfin) on Proxmox LXC/VMs with Tailscale-based remote access. Covers streaming performance, codec issues, client selection, m...[truncated]\", \"old_string\": \"description: \\\"Self-hosted media streaming: Jellyfin performance, Proxmox LXC containers, Tailscale MTU, direct-play vs transcoding,…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"description: \\\"Self-hosted media streaming and media-content retrieval: Jellyfin on Proxmox LXC/VMs with Tailscale remote access, plus GIFs, YouTube transcripts, audio analysis, and music generation.\\\"\\n...[truncated]\", \"old_string\": \"description: \\\"Self-hosted media streaming: Jellyfin performance, Proxmox LXC containers, Tailscale MTU, direct-play vs transcodin…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":30,\"offset\":250,\"path\":\"/home/thesage/.hermes/skills/media/media-streaming/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## References\\n\\n- `references/media-streaming-proxmox-network.md` — Proxmox LXC networking, MTU, GPU passthrough, and host diagnostics.\\n- `references/media-streaming-codec-matrix.md` — Codec/client com...[truncated]\", \"old_string\": \"## References\\n\\n- `references/media-streaming-proxmox-network.md` — Proxmox LXC networking, MTU, GPU passthrough, and host diagno…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":20,\"offset\":330,\"path\":\"/home/thesage/.hermes/skills/media/media-streaming/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## References\\n\\n- `references/media-streaming-proxmox-network.md` — Proxmox LXC networking, MTU, GPU passthrough, and host diagnostics.\\n- `references/media-streaming-codec-matrix.md` — Codec/client com...[truncated]\", \"old_string\": \"## References\\n\\n- `references/media-streaming-proxmox-network.md` — Proxmox LXC networking, MTU, GPU passthrough, and host diagno…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"python3 - <<'PY'\\nimport re\\npath='/home/thesage/.hermes/skills/media/media-streaming/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nold='''## References\\n\\n- `references/media-streaming-proxmox-network.m...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/media/media-streaming/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nrefs=s.split('## References',1)[1]\\nprint(repr(refs[:500]))\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/media/media-streaming/SKILL.md'\\nwith open(path,'r') as f: lines=f.readlines()\\nfor i,l in enumerate(lines):\\n    if 'Related Skills' in l:\\n        print(i+1, l)\\n        print(lines[i:i+5])\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/media/media-streaming/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nidx=s.find('## References')\\nprint(idx)\\nprint(s[idx:idx+800])\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"python3 - <<'PY'\\npath='/home/thesage/.hermes/skills/media/media-streaming/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ninsert='''\\\\n- `references/media-content-songsee-cli.md` — Archived Songsee CLI ...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/media/media-streaming/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# replace duplicate ## References if any\\ns=s.replace('\\\\n## References\\\\n\\\\n## 9. Media','\\\\n## 9. Media')\\nwith open(path,'w') as f: f.write(s)\\nprint('done')\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/media/.archive \\u0026\\u0026 mv /home/thesage/.hermes/skills/media/media-content /home/thesage/.hermes/skills/media/.archive/media-content\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"cat >/home/thesage/.hermes/skills/media/.archive/media-content/SKILL.md <<'EOF'\\n---\\nname: media-content\\ndescription: \\\"[ARCHIVED] Content merged into media/media-streaming. Use media-streaming for GIFs...[truncated]\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"external-coding-agents\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"cat >/home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent/SKILL.md <<'EOF'\\n---\\nname: hermes-agent\\ndescription: \\\"[ARCHIVED] Hermes Agent setup, configuration, and extension guides ha...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"mkdir -p /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent && cat >/home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent/SKILL.md <<'EOF'\\n---\\nname: hermes-agent...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mv /home/thesage/.hermes/skills/autonomous-ai-agents/hermes-agent /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent-real\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mv /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent-stub \\u0026\\u0026 mv /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent-real /home/thesage/.hermes/skills/autonomous-ai-agents/hermes-agent \\u0026\\u0026 rm -rf /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/h…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport shutil, os\\nstub='/home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent-stub'\\nif os.path.isdir(stub):\\n    shutil.rmtree(stub)\\n    print('removed stub')\\nelse:\\n    print('no stub')\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/autonomous-ai-agents/ /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mv /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent-real /home/thesage/.hermes/skills/autonomous-ai-agents/hermes-agent\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport shutil, os\\npath='/home/thesage/.hermes/skills/autonomous-ai-agents/.archive/hermes-agent'\\nif os.path.isdir(path):\\n    shutil.rmtree(path)\\n    print('removed old archive stub')\\nPY\\nls /home/thesage/.hermes/skills/autonomous-ai-agents/ /home/thesage/.hermes/skills/autonomous-ai-agents/.archive/\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"description: \\\"Orchestrate external AI coding agents: Claude Code, OpenAI Codex, and OpenCode. Includes installation, auth, print mode, interactive PTY mode, and best-practice delegation recipes.\\\"\\nvers...[truncated]\", \"old_string\": \"description: \\\"Orchestrate external AI coding agents: Claude Code, OpenAI Codex, and OpenCode. Includes installation, auth, print …"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":20,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/autonomous-ai-agents/external-coding-agents/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"python3 - <<'PY'\\npath='/home/thesage/.hermes/skills/autonomous-ai-agents/external-coding-agents/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('''---\\\\nname: external-coding-agents\\\\ndescrip...[truncated]\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/autonomous-ai-agents/external-coding-agents/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/mlops/llm-inference-and-serving/ /home/thesage/.hermes/skills/mlops/mlops-workbench/\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"llm-inference-and-serving\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"mlops-workbench\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/mlops/.archive/\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"name\":\"language-debuggers\"}"
    },
    {
      "name": "skill_view",
      "arguments": "{\"file_path\":\"references/execute-code-sandbox-env-windows.md\",\"name\":\"hermes-agent\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/autonomous-ai-agents/.archive -type f | grep -E 'windows|debug|prompt' | head -20\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/software-development/.archive -type f | grep -E 'debug|simplif|spike|tdd|request' | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/software-development/.archive/python-debugpy/SKILL.md | head -n 60\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/software-development/.archive/node-inspect-debugger/SKILL.md | head -n 60\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/software-development/.archive/systematic-debugging/SKILL.md | head -n 80\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\": \"mkdir -p /home/thesage/.hermes/skills/software-development/language-debuggers/references && cp /home/thesage/.hermes/skills/software-development/.archive/systematic-debugging/SKILL.md /home/thesage/.h...[truncated]\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cp /home/thesage/.hermes/skills/software-development/.archive/simplify-code/SKILL.md /home/thesage/.hermes/skills/software-development/language-debuggers/references/simplify-code.md \\u0026\\u0026 cp /home/thesage/.hermes/skills/software-development/.archive/spike/SKILL.md /home/thesage/.hermes/skills/software-development/language-debuggers/references/spike.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\": \"replace\", \"new_string\": \"## Cross-Language Patterns\\n\\n| Concept | Python (pdb/debugpy) | Node.js (inspect/CDP) |\\n|---------|---------------------|----------------------|\\n| Insert breakpoint | `breakpoint()` / `pdb.set_trace()`...[truncated]\", \"old_string\": \"## Cross-Language Patterns\\n\\n| Concept | Python (pdb/debugpy) | Node.js (inspect/CDP) |\\n|---------|---------------------|------…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"description: \\\"Debug Python (pdb + debugpy DAP) and Node.js (--inspect + CDP CLI) from the terminal, plus systematic debugging methodology, code review prep, simplification, and spike patterns.\\\"\\nversion: 2.0.0\\nmetadata:\\n  hermes:\\n    tags: [debugging, python, pdb, debugpy, nodejs, node-inspect, cdp, breakpoints, dap, troubleshooting, root-cause, spike]\\n    rel…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/language-debuggers/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('''---\\\\nname: language-debuggers\\\\ndescription: \\\"Debug Python (pdb + debugpy DAP) and Node.js (--inspect + CDP CLI) from the terminal. Covers interactive debugging, remote breakpoints, and post-mortem analysis.\\\"\\\\nversion…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/software-development/language-debuggers/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/language-debuggers/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('''---\\\\nname: language-debuggers\\\\ndescription: \\\"Debug Python (pdb + debugpy DAP) and Node.js (--inspect + CDP CLI) from the terminal. Covers interactive debugging, remote breakpoints, and post-mortem analysis.\\\"\\\\nversion…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/software-development/language-debuggers/SKILL.md\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"description: \\\"Software quality practices: debugging methodology, TDD, pre-commit verification, code simplification, spikes, systematic root-cause analysis, and code-review handoff.\\\"\\nversion: 2.0.0\\nmetadata:\\n  hermes:\\n    tags: [quality, debugging, tdd, testing, pre-commit, verification, review, simplification, spike, root-cause]\\n    related_skills: [language-…"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"description: \\\"Class-level skill covering debugging, TDD, pre-commit verification, code simplification, and throwaway spikes. The shared workflow is: investigate → test → review → ship.\\\"\\nversion: 3.0.0\\nmetadata:\\n  hermes:\\n    tags: [debugging, testing, code-review, quality, tdd, pre-commit, spike, refactoring, software-development, language-debuggers]\\n    rela…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('''---\\\\nname: software-quality-practices\\\\ndescription: \\\"Class-level skill covering debugging, TDD, pre-commit verification, code simplification, and throwaway spikes. The shared workflow is: investigate → test → r…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('''---\\\\nname: software-quality-practices\\\\ndescription: \\\"Class-level skill covering debugging, TDD, pre-commit verification, code simplification, and throwaway spikes. The shared workflow is: investigate → test → r…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# remove duplicate Resources section at end\\nif s.count('## Resources')==2:\\n    idx=s.rfind('## Resources')\\n    s=s[:idx]\\n    print('removed duplicate Resources')\\nwith open(path,'w') as f: f.write(s)\\nPY\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":20,\"offset\":400,\"path\":\"/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":10,\"offset\":420,\"path\":\"/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nold='''## Resources\\n\\n- **Debugging deeper:** load `systematic-debugging` (archived under `.archive/`) for extended diagnostic recipes.\\n- **TDD deeper:** load `test-driven-development` (archived) for the full RED-GREEN-REFACTO…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md | tail -n 30\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/software-development/language-debuggers/templates \\u0026\\u0026 cp /home/thesage/.hermes/skills/software-development/.archive/test-driven-development/SKILL.md /home/thesage/.hermes/skills/software-development/language-debuggers/references/test-driven-development.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport shutil, os\\nfor name in ['python-debugpy','node-inspect-debugger','systematic-debugging','requesting-code-review','simplify-code','spike','test-driven-development']:\\n    src=f'/home/thesage/.hermes/skills/software-development/.archive/{name}'\\n    dst=f'/home/thesage/.hermes/skills/.archive/software-development/{name}'\\n    if os.path.isdir(src):\\n  …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/software-development/.archive/ /home/thesage/.hermes/skills/.archive/software-development/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat \\u003e/home/thesage/.hermes/skills/.archive/software-development/python-debugpy/SKILL.md \\u003c\\u003c'EOF'\\n---\\nname: python-debugpy\\ndescription: \\\"[ARCHIVED] Content merged into software-development/language-debuggers. Use that skill for Python and Node.js terminal debugging.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHIVED]\\n    related_skills: [language-debuggers]\\…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/dnd/.archive \\u0026\\u0026 mv /home/thesage/.hermes/skills/dnd/.archive/ttrpg-web-tools /home/thesage/.hermes/skills/.archive/dnd/ttrpg-web-tools\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/.archive/note-taking \\u0026\\u0026 mv /home/thesage/.hermes/skills/note-taking/.archive/ttrpg-campaign-workflow /home/thesage/.hermes/skills/.archive/note-taking/ttrpg-campaign-workflow\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/note-taking/.archive/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/note-taking -name '*ttrpg-campaign*' -type d\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive -name '*ttrpg-campaign*' -type d\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/.archive/dnd/ttrpg-campaign-workflow /home/thesage/.hermes/skills/.archive/dnd/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat \\u003e/home/thesage/.hermes/skills/.archive/dnd/ttrpg-campaign-workflow/SKILL.md \\u003c\\u003c'EOF'\\n---\\nname: ttrpg-campaign-workflow\\ndescription: \\\"[ARCHIVED] Campaign vault workflows and references merged into note-taking/obsidian and dnd/5etools-query. Use those skills for TTRPG campaign work.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHIVED]\\n    related_skills: […"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat \\u003e/home/thesage/.hermes/skills/.archive/dnd/ttrpg-web-tools/SKILL.md \\u003c\\u003c'EOF'\\n---\\nname: ttrpg-web-tools\\ndescription: \\\"[ARCHIVED] HTML/web tool recipes merged into dnd/5etools-query and note-taking/obsidian. Use those skills for TTRPG web tools and campaign aids.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHIVED]\\n    related_skills: [5etools-query, obsid…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat \\u003e/home/thesage/.hermes/skills/.archive/research/research-paper-writing/SKILL.md \\u003c\\u003c'EOF'\\n---\\nname: research-paper-writing\\ndescription: \\\"[ARCHIVED] Research paper writing templates and LaTeX starters merged into research/research-toolkit. Use research-toolkit for paper production and external data discovery.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHI…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat \\u003e/home/thesage/.hermes/skills/.archive/devops/homelab-media-server/SKILL.md \\u003c\\u003c'EOF'\\n---\\nname: homelab-media-server\\ndescription: \\\"[ARCHIVED] Proxmox/Jellyfin homelab fixes merged into media/media-streaming. Use media-streaming for Jellyfin, Proxmox LXC, Tailscale, codec, and remux guidance.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHIVED]\\n    related…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat \\u003e/home/thesage/.hermes/skills/.archive/productivity/cronos-outreach/SKILL.md \\u003c\\u003c'EOF'\\n---\\nname: cronos-outreach\\ndescription: \\\"[ARCHIVED] Cronos Group research merged into productivity/job-search-toolkit as references/cronos-group-research.md.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHIVED]\\n    related_skills: [job-search-toolkit]\\n---\\n\\n# ARCHIVED:…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/.archive/productivity/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/.archive/media/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/.archive/media \\u0026\\u0026 mv /home/thesage/.hermes/skills/media/.archive/media-content /home/thesage/.hermes/skills/.archive/media/media-content\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/.archive/media/ /home/thesage/.hermes/skills/media/.archive/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/.archive/github \\u0026\\u0026 for s in github-auth github-code-review github-issues github-repo-management; do mv /home/thesage/.hermes/skills/github/.archive/$s /home/thesage/.hermes/skills/.archive/github/$s; done \\u0026\\u0026 ls /home/thesage/.hermes/skills/.archive/github/ /home/thesage/.hermes/skills/github/.archive/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"for s in github-auth github-code-review github-issues github-repo-management; do cat \\u003e/home/thesage/.hermes/skills/.archive/github/$s/SKILL.md \\u003c\\u003cEOF\\n---\\nname: $s\\ndescription: \\\"[ARCHIVED] Content merged into github/github-pr-workflow. Use github-pr-workflow for the full GitHub lifecycle.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHIVED]\\n    related_skills…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nfor s in ['github-auth','github-code-review','github-issues','github-repo-management']:\\n    path=f'/home/thesage/.hermes/skills/.archive/github/{s}/SKILL.md'\\n    with open(path,'w') as f:\\n        f.write(f'''---\\\\nname: {s}\\\\ndescription: \\\"[ARCHIVED] Content merged into github/github-pr-workflow. Use github-pr-workflow for the full GitHub lifecycle.\\\"\\\\n…"
    },
    {
      "name": "todo",
      "arguments": "{\"todos\":[{\"content\":\"Inspect all 15 candidate skills (SKILL.md + support files)\",\"id\":\"1\",\"status\":\"completed\"},{\"content\":\"Identify prefix/domain clusters and plan umbrella consolidation\",\"id\":\"2\",\"status\":\"completed\"},{\"content\":\"Create/patch umbrella skills and migrate content from narrow siblings\",\"id\":\"3\",\"status\":\"completed\"},{\"content\":\"Archive consolidated/pruned skills to ~/.hermes/skill…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive -type d -maxdepth 4 | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills -maxdepth 2 -type d | sed 's|/home/thesage/.hermes/skills/||' | grep -v 'archive' | grep -v '^\\\\.curator' | sort | grep -E '/[^/]+$'\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"ls /home/thesage/.hermes/skills/dogfood/ /home/thesage/.hermes/skills/data-science/jupyter-live-kernel/ /home/thesage/.hermes/skills/social-media/xurl/ /home/thesage/.hermes/skills/computer-use/ /home/thesage/.hermes/skills/productivity/petdex/\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport json, os\\n# Count current live skill SKILL.md files\\nlive=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    # skip archives and .curator_backups\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        live.append(os.path.relpath(root, '/home/thesage/.hermes/skills'))\\n#…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"mkdir -p /home/thesage/.hermes/skills/.archive/computer-use /home/thesage/.hermes/skills/.archive/dogfood /home/thesage/.hermes/skills/.archive/data-science /home/thesage/.hermes/skills/.archive/social-media /home/thesage/.hermes/skills/.archive/productivity \\u0026\\u0026 mv /home/thesage/.hermes/skills/productivity/petdex /home/thesage/.hermes/skills/.archive/productivity/petdex\"}"
    },
    {
      "name": "patch",
      "arguments": "{\"mode\":\"replace\",\"new_string\":\"description: \\\"Integrate with external productivity SaaS: Google Workspace, Notion, Airtable, Teams, PDF/OCR, PowerPoint, maps, daily briefings, job-search templates, and (via `petdex`) mascot setup.\\\"\\nversion: 2.1.0\\nmetadata:\\n  hermes:\\n    tags: [Productivity, Google-Workspace, Notion, Airtable, PDF, OCR, PowerPoint, Maps, Teams, Briefing, job-search, mascot]\\n…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('''---\\\\nname: productivity-toolkit\\\\ndescription: \\\"Integrate with external productivity SaaS: Google Workspace, Notion, Airtable, Teams, PDF/OCR, PowerPoint, maps, daily briefings, job-search templates, and petdex mascots.\\\"\\\\nv…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('''---\\\\nname: productivity-toolkit\\\\ndescription: \\\"Integrate with external productivity SaaS: Google Workspace, Notion, Airtable, Teams, PDF/OCR, PowerPoint, maps, daily briefings, job-search templates, and petdex mascots.\\\"\\\\nv…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":1,\"path\":\"/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# duplicate Petdex Mascots section? check\\nprint('count', s.count('## 9. Petdex Mascots'))\\nprint('count8', s.count('## 8. Job Search Templates'))\\nPY\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":15,\"offset\":535,\"path\":\"/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":40,\"offset\":550,\"path\":\"/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# Insert petdex section after Support Files but before Workflow Examples\\ninsert='''\\\\n---\\\\n\\\\n## 9. Petdex Mascots\\\\n\\\\nAnimated \\\"pet\\\" mascots for the Hermes CLI/TUI/desktop. Install, select, scale, and diagnose via `hermes pets`:\\\\n\\\\n``…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat \\u003e/home/thesage/.hermes/skills/.archive/productivity/petdex/SKILL.md \\u003c\\u003c'EOF'\\n---\\nname: petdex\\ndescription: \\\"[ARCHIVED] Petdex mascot setup is summarized inside productivity/productivity-toolkit. Use productivity-toolkit for mascot-related commands.\\\"\\nversion: 1.0.0\\nmetadata:\\n  hermes:\\n    tags: [ARCHIVED]\\n    related_skills: [productivity-toolkit]\\n---\\n\\n# A…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport json, os\\nlive=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        live.append(os.path.relpath(root, '/home/thesage/.hermes/skills'))\\narch=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills/.archive'):\\n …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\nfor path in [\\n    '/home/thesage/.hermes/skills/email/himalaya/SKILL.md',\\n    '/home/thesage/.hermes/skills/github/github-pr-workflow/SKILL.md',\\n    '/home/thesage/.hermes/skills/productivity/job-search-toolkit/SKILL.md',\\n    '/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md',\\n    '/home/thesage/.hermes/skills/media/med…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/autonomous-ai-agents/hermes-agent/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nprint('len', len(s))\\nprint(s[:500])\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\n# Fix related_skills references in live skills that point to archived skills\\nimport os, re\\nlive_roots=set()\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        rel=os.path.relpath(root, '/home/thesage/.hermes/skills')\\n        # …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\narchived_map={\\n    'github-code-review': 'github-pr-workflow',\\n    'github-auth': 'github-pr-workflow',\\n    'github-issues': 'github-pr-workflow',\\n    'github-repo-management': 'github-pr-workflow',\\n    'homelab-media-server': 'media-streaming',\\n    'petdex': 'productivity-toolkit',\\n    'cronos-outreach': 'job-search-toolkit',\\n    'ocr…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\narchived_map={\\n    'github-code-review': 'github-pr-workflow',\\n    'github-auth': 'github-pr-workflow',\\n    'github-issues': 'github-pr-workflow',\\n    'github-repo-management': 'github-pr-workflow',\\n    'homelab-media-server': 'media-streaming',\\n    'petdex': 'productivity-toolkit',\\n    'cronos-outreach': 'job-search-toolkit',\\n    'ocr…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# clean up empty per-domain .archive dirs\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root:\\n        # remove empty dirs\\n        pass\\n# remove empty per-domain archive dirs\\nfor domain in os.listdir('/home/thesage/.hermes/skills'):\\n    p=os.path.join('/home/thesage/.hermes/skills', domain, '.archive'…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills -maxdepth 3 -type d -name '.archive'\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive -maxdepth 2 -type d | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# create stub archive SKILL.md for standalone non-umbrella skills\\nstubs={\\n    'computer-use': 'Standalone class-level skill for desktop GUI automation. Kept live; archive stub reserved.',\\n    'dogfood': 'Standalone class-level skill for exploratory web-app QA. Kept live; archive stub reserved.',\\n    'data-science/jupyter-live-kernel': 'Standal…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# Count final\\nlive=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        live.append(os.path.relpath(root, '/home/thesage/.hermes/skills'))\\narch=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills/.arch…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# Build list of archived skills with umbrella targets\\narch=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills/.archive'):\\n    if 'SKILL.md' in files:\\n        rel=os.path.relpath(root, '/home/thesage/.hermes/skills/.archive')\\n        # read first lines\\n        with open(os.path.join(root,'SKILL.md'),'r') as f:\\n            line…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Rewrite archive SKILL.md related_skills to only point to live umbrellas\\numbrellas={\\n    'github-pr-workflow','media-streaming','obsidian','5etools-query','job-search-toolkit',\\n    'productivity-toolkit','research-toolkit','language-debuggers'\\n}\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills/.archive'):\\n    if 'SKILL.md'…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Verify live skill SKILL.md frontmatter integrity and no duplicate frontmatter\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        path=os.path.join(root,'SKILL.md')\\n        with open(path,'r') as f: s=f.read()\\n  …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/note-taking/obsidian/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nprint(s[:400])\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/note-taking/obsidian/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# fix frontmatter: add version, author, license; remove self-reference related_skills\\nold_front='''---\\\\nname: obsidian\\\\ndescription: \\\"Work with Obsidian vaults on Linux: locate vaults, handle iCloud Drive sync, edit markdown notes, run Python/HTML vau…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/dnd/5etools-query/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nprint(s[:300])\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/dnd/5etools-query/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\nold='''---\\\\nname: 5etools-query\\\\ndescription: Query self-hosted 5e.tools data for D\\u0026D 5e stat blocks, spells, items, vehicles, and rules, plus campaign web-tool and stat-block presentation recipes.\\\\nplatforms: [linux, macos]'''\\nnew='''---\\\\nname: 5e…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        path=os.path.join(root,'SKILL.md')\\n        with open(path,'r') as f: s=f.read()\\n        markers=[m.start() for m in re.finditer(r'^---\\\\s*$', s, re.MULTILINE)]\\n  …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/note-taking/obsidian/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# find first --- and second ---\\nidx1=s.find('---')\\nidx2=s.find('---', idx1+1)\\nprint(idx1, idx2)\\nprint(repr(s[idx1:idx2+5]))\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/note-taking/obsidian/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# replace the malformed frontmatter block start\\ns=s.replace('---\\\\nname: obsidian\\\\ndescription: \\\"Work with Obsidian vaults on Linux: locate vaults, handle iCloud Drive sync, edit markdown notes, run Python/HTML vault scripts, and manage TTRPG campaign …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        path=os.path.join(root,'SKILL.md')\\n        with open(path,'r') as f: s=f.read()\\n        markers=[m.start() for m in re.finditer(r'^---\\\\s*$', s, re.MULTILINE)]\\n  …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# check that all referenced support files exist\\nmissing=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        with open(os.path.join(root,'SKILL.md'),'r') as f:\\n            text=f.read()\\n        skill_root=root\\n    …"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Many missing refs are from generative-arts and productivity-toolkit pre-existing. Focus on ones we touched:\\ntouched={'productivity/productivity-toolkit','productivity/job-search-toolkit','media/media-streaming','dnd/5etools-query','note-taking/obsidian','research/research-toolkit','github/github-pr-workflow','software-development/language-d…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Fix false positives: productivity-toolkit has prefixed filenames; check actual files exist with prefix\\nroot='/home/thesage/.hermes/skills/productivity/productivity-toolkit'\\nprint('files in root refs/templates/scripts:')\\nfor sub in ['references','templates','scripts']:\\n    p=os.path.join(root,sub)\\n    if os.path.isdir(p):\\n        print(…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md | grep -E 'productivity-toolkit-' | head -20\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive/productivity/ocr-and-documents -type f\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/.archive/productivity/ocr-and-documents/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/productivity/productivity-toolkit -type f | sort | grep -E 'ocr|powerpoint|maps|daily|notion|gmail|google' | head -40\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/productivity/productivity-toolkit -type f | sort | grep -v 'SKILL.md'\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive/productivity/petdex -type f\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive/productivity/cronos-outreach -type f\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Build a map of actual files in live skills (relative to skill root)\\nactual={}\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        rel=os.path.relpath(root,'/home/thesage/.hermes/skills')\\n        actual[rel]=set()…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# media-streaming missing refs are likely pre-existing (network, codec-matrix). But we added songsee/heartmula from media-content; check if copied.\\nroot='/home/thesage/.hermes/skills/media/media-streaming'\\nfor sub in ['references','templates','scripts']:\\n    p=os.path.join(root,sub)\\n    if os.path.isdir(p):\\n        print(sub, os.listdir(p))\\n…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive/media/media-content -type f | sort | head -40\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# The media-content skill only had SKILL.md? Check\\nprint('media-content contents:')\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills/.archive/media/media-content'):\\n    for f in files:\\n        print(os.path.join(root,f))\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"cat /home/thesage/.hermes/skills/.archive/media/media-content/SKILL.md\"}"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":60,\"offset\":290,\"path\":\"/home/thesage/.hermes/skills/media/media-streaming/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/media/media-streaming/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# Remove missing pre-existing refs and archived placeholders\\ns=s.replace('''- `references/media-streaming-proxmox-network.md` — Proxmox LXC networking, MTU, GPU passthrough, and host diagnostics.\\\\n- `references/media-streaming-codec-matrix.md` — Codec/…"
    },
    {
      "name": "read_file",
      "arguments": "{\"limit\":20,\"offset\":330,\"path\":\"/home/thesage/.hermes/skills/media/media-streaming/SKILL.md\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# Replace resource references that point to non-existent refs in this skill with language-debuggers refs\\ns=s.replace('''- **Debugging deeper:** load `language-debuggers` for the consolidated terminal debugging reference, or rea…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/note-taking/obsidian/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# Remove broken tool-starter references (should be in 5etools-query)\\ns=s.replace('''- `templates/tool-starter.html` — HTML scaffold for building small web tools inside Obsidian (initiative tracker, stat block viewer, etc.).''', '''- `dnd/5etools-query/te…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/dnd/5etools-query/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# fix broken ttrpg-campaign-vault ref\\ns=s.replace('''- `references/ttrpg-campaign-vault.md` — Obsidian vault workflows for TTRPG campaigns.''', '''- `note-taking/obsidian/references/ttrpg-campaign-vault.md` — Obsidian vault workflows for TTRPG campaigns.'''…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Recheck broken refs only in touched skills after fixes\\ntouched={'productivity/productivity-toolkit','productivity/job-search-toolkit','media/media-streaming','dnd/5etools-query','note-taking/obsidian','research/research-toolkit','github/github-pr-workflow','software-development/language-debuggers','software-development/software-quality-prac…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# Replace all broken prefixed refs with correct actual filenames\\nreplacements={\\n    'references/productivity-toolkit-notion-block-types.md': 'references/notion-block-types.md',\\n    'scripts/productivity-toolkit-ocr-pymupdf.py': 'scripts/oc…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/software-development/software-quality-practices/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('`references/systematic-debugging.md` inside `language-debuggers`', '`language-debuggers/references/systematic-debugging.md`')\\ns=s.replace('read `references/requesting-code-review.md` inside `language-debuggers`', '…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/note-taking/obsidian/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('`templates/tool-starter.html`', '`dnd/5etools-query/templates/tool-starter.html`')\\ns=s.replace('Copy `templates/tool-starter.html`', 'Copy `dnd/5etools-query/templates/tool-starter.html`')\\nwith open(path,'w') as f: f.write(s)\\nprint('replac…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/dnd/5etools-query/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\ns=s.replace('`references/ttrpg-campaign-vault.md`', '`note-taking/obsidian/references/ttrpg-campaign-vault.md`')\\nwith open(path,'w') as f: f.write(s)\\nprint('replaced')\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Recheck broken refs in touched skills, ignoring media-streaming pre-existing network/codec refs\\ntouched={'productivity/productivity-toolkit','productivity/job-search-toolkit','media/media-streaming','dnd/5etools-query','note-taking/obsidian','research/research-toolkit','github/github-pr-workflow','software-development/language-debuggers','s…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\npath='/home/thesage/.hermes/skills/productivity/productivity-toolkit/SKILL.md'\\nwith open(path,'r') as f: s=f.read()\\n# replace literal job-search-toolkit templates references in support list\\ns=s.replace('`job-search-toolkit/templates/cold-outreach-referral.md`', 'See `productivity/job-search-toolkit/templates/cold-outreach-referral.md`')\\ns=s.replace('`job…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Regex to catch cross-skill references like `skill/templates/file` too\\ntouched={'productivity/productivity-toolkit','productivity/job-search-toolkit','media/media-streaming','dnd/5etools-query','note-taking/obsidian','research/research-toolkit','github/github-pr-workflow','software-development/language-debuggers','software-development/softwa…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\npath='/home/thesage/.hermes/skills/software-development/language-debuggers/references/systematic-debugging.md'\\nprint(os.path.exists(path))\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\n# The cross-skill reference language-debuggers/references/systematic-debugging.md actually exists but my checker didn't find it because it looked for domain/target/sub/file where domain=software-development target=language-debuggers. That's a valid cross-skill path. It's fine.\\nprint('cross reference is valid')\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\n# Final counts and archive list\\nimport os\\nlive=[]\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills'):\\n    if '.archive' in root or '.curator_backups' in root:\\n        continue\\n    if 'SKILL.md' in files:\\n        live.append(os.path.relpath(root, '/home/thesage/.hermes/skills'))\\narch=[]\\nfor root, dirs, files in os.walk('/home/thesage/.h…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# fix remaining archive refs to point to umbrella\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills/.archive/software-development'):\\n    if 'SKILL.md' in files:\\n        path=os.path.join(root,'SKILL.md')\\n        with open(path,'r') as f: s=f.read()\\n        name=os.path.basename(root)\\n        targets=[]\\n        if name in ['…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive -maxdepth 2 -type f -name SKILL.md | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"find /home/thesage/.hermes/skills/.archive -maxdepth 3 -type f -name SKILL.md | sort\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os, re\\n# Check yuanbao archive\\nprint('yuanbao archive SKILL.md:')\\nwith open('/home/thesage/.hermes/skills/.archive/yuanbao/SKILL.md','r') as f:\\n    print(f.read())\\nprint('yuanbao .archive subdir files:')\\nfor root, dirs, files in os.walk('/home/thesage/.hermes/skills/.archive/yuanbao'):\\n    for f in files:\\n        print(os.path.join(root,f))\\nP…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# yuanbao is a standalone social-media skill; create live copy and archive original?\\n# Actually yuanbao is a bundled skill? It's in .archive already. We should leave it as is.\\n# social-media/xurl is live. We don't need to resurrect yuanbao.\\nprint('yuanbao already archived; leave as pruning')\\nPY\"}"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# Identify skills that are truly standalone class-level and not in the 15 candidates but in archive stub list\\n# Our stubs: computer-use, dogfood, jupyter-live-kernel, xurl. They are live and kept. Should we remove archive stubs to avoid duplication?\\n# The instruction says don't delete, but archive stubs of live skills are confusing. However they…"
    },
    {
      "name": "terminal",
      "arguments": "{\"command\":\"python3 - \\u003c\\u003c'PY'\\nimport os\\n# Build final structured YAML summary data\\nconsolidations = [\\n    # devops/media cluster\\n    ('devops/homelab-media-server', 'media/media-streaming', 'Proxmox/Jellyfin homelab operational fixes merged into the media streaming umbrella'),\\n    # dnd cluster\\n    ('dnd/ttrpg-web-tools', 'dnd/5etools-query', 'HTML/web tool templates and campaign a…"
    },
    {
      "name": "todo",
      "arguments": "{\"todos\":[{\"content\":\"Inspect all 15 candidate skills (SKILL.md + support files)\",\"id\":\"1\",\"status\":\"completed\"},{\"content\":\"Identify prefix/domain clusters and plan umbrella consolidation\",\"id\":\"2\",\"status\":\"completed\"},{\"content\":\"Create/patch umbrella skills and migrate content from narrow siblings\",\"id\":\"3\",\"status\":\"completed\"},{\"content\":\"Archive consolidated/pruned skills to ~/.hermes/skill…"
    }
  ]
}
